You misunderstand. The LAME plugin is only a conjurations override. If you do not know what conjurations are, you can probably Google that or look it up at UESP Wiki. Custom conjurations has nothing to do with SM's default behavior removing some of the standard starting spells.
Please, please, read mods' descriptions before you add them. SM and LAME both extend the average duration of many spells: SM ~x3, LAME ~x4. You have not described something being "broken" yet. You are just being surprised by those mods' features, clearly outlined in the docs.
Bg2408's Magic Overhaul Comparison - http://www.gamesas.com/bgsforums/index.php?showtopic=814477 <-- maybe reading this will help
The LAME plugin does work. You just do not understand what it is doing. Read the ReadMe, please. Remember, you should not even use that unless you have SM loading after LAME. If you ran BOSS, that is no longer the case, and you should not have that plugin activated.
The only problem that is still open (as far as I can tell from your posts) is that the logs are missing from the Starter Dungeon. That is not okay. Have you tried uninstalling QTP3?
Actually I mean that the summon skeleton spell stays for 30.000 seconds and not for 3x or 4x.
I'm a noob of course, but not completely.... I play SM since the 0.86 version, so I know the features, and with my previous build (with FCOM) I added LAME.
I know about all the features of those magic overhauls and I spent week to read readmes before adding them.... So I absure you I am not the usual kid wich not read readmes and descriptions before adding mods.
As for BOSS, yes I use it but I change my load order with OBMM, moving down SM, after LAME to make stats prevail. I did this way with my previous builf, with FCOM full installed and it worked without a single problem.
As for the log, I didn't checked again... I'll start and see if they are there
EDIT: I seem to have this problem only with SM activated... And I didn't have with version 0.89b... Only with 0.90b3.
Changing the load order and putting LAME after SM fixes this issue, but I lose SM's stats