Really I need exact file names - best to copy straight from BOSS html output file
And I also really need links so I can look at them in Wrye Flash / FO3Edit and see what dependancies they have and what bash tags they might need.
Also, posting in the BOSS for fallout thread http://www.gamesas.com/index.php?/topic/1098111-relz-boss-f-thread-2/is good too, so it's all in 1 place (although that thread is very nearly full so I'll be starting a new one very soon.)
That said, any unknown esm files should still be moved to the end of the esm list - if you've patched your game and you d/l very old mods, their timestamps could be earlier than fallout.esm, but BOSS should NOT be doing that! Are you sure you're listing them by load order?