I noticed the same thing, also I came across some places with floating rocks and other terrain stuff thats not on the ground. Some npc's, scorpions, centaurs etc stuck in the terrain with half of their body buried, they're unkillable since its like the bullets hit a invisible wall, explosives doesn't work either, had to open up console click on exposed part and type "kill" cause otherwise my companions would be stuck there trying to kill it forever.