On a hunch, I start warping my companions (that are still at the monument) to me. I get to Charon and the game crashes. So I think, "hey that's weird" and reload and try "resetting" him according to the instructions at http://fallout.wikia.com/wiki/Fallout_3_console_commands. When I attempt to disable Charon, the game crashes. I can kill/resurrect him, OpenTeammateContainer him and interact with his inventory, but cannot disable him. I attempt to wait 24 hours and see what the game does with him, and the game crashes. Also if I fast travel somewhere that takes a decent amount of time, it crashes. I assume this is because the game it trying to warp him to the Ninth Circle and crashing.
Any ideas on how I can fix this?