Try using https://loot.github.io/ instead of BOSS.
Not sure if it would matter, but I think SkyUI should come after the US patches.
Also, consider using http://www.nexusmods.com/skyrim/mods/59849/? instead of SkyRe. If you do install PerMa I recommend also using the "defluffer" mod. T3ndo's descriptions of the perks are beautiful, meaningless, artistic fluff; but the defluffer makes them nice and clear.
http://www.nexusmods.com/skyrim/mods/60570/?
Also, a page that provides more info on what all the perks mean and do
http://steamcommunity.com/sharedfiles/filedetails/?id=343781635
Note, PerMa is a bit unlike other mods. I'd get everything in your load order sorted, then install PerMa (and whichever modules of it you want). Then you have to run the PerMa "Patcher."
FYI My Skyrim load order:
Spoiler GameMode=Skyrim
Skyrim.esm=1
Update.esm=1
Unofficial Skyrim Patch.esp=1
Dawnguard.esm=1
Unofficial Dawnguard Patch.esp=1
HearthFires.esm=1
Unofficial Hearthfire Patch.esp=1
Dragonborn.esm=1
Unofficial Dragonborn Patch.esp=1
ApachiiHair.esm=1
Extended UI.esp=1
BardSoundsMalukah.esp=1
RaceMenu.esp=1
AHZmoreHUD.esp=1
Fast Respawn 360 Hours 1.2.esp=1
RaceMenuPlugin.esp=1
craftable iron lockpicks.esp=1
iHUD.esp=1
LadyKdCirclets.esp=1
LeftHandRings - Dawnguard.esp=1
LeftHandRings.esp=1
When Vampires Attack.esp=1
RAS - Riverwood CharGen.esp=1
eyes for elves.esp=1
Realistic Lighting Overhaul - Dungeons.esp=1
Dr_Bandolier.esp=1
Convenient Horses.esp=1
AK_RM_PubicStyles_All_In_One.esp=1
SkyUI.esp=1
SkyrimSpellCleaner.esp=1
SMDropLitTorch.esp=1
Superior Rorikstead.esp=1
Realistic Lighting Overhaul - Major City Exteriors.esp=1
UnlimitedBookshelves.esp=1
Dragon Stalking Fix.esp=1
Hothtrooper44_Armor_Ecksstra.esp=1
Realistic Lighting Overhaul - Major City Interiors.esp=1
LocalizedGuildJobs.esp=1
Realistic Lighting Overhaul - Dawnguard Interiors.esp=1
Realistic Lighting Overhaul - Weathers.esp=1
RLO - Adaptive Interiors Vanilla Weathers Patch.esp=0
RealisticNeedsandDiseases.esp=1
RND_Dawnguard-Patch.esp=1
RND_Dragonborn-Patch.esp=1
V740T_MGolDinS&M.esp=1
Weapons & Armor Fixes_Remade.esp=1
AmazingFollowerTweaks.esp=1
Immersive Weapons.esp=1
WeaponsArmorFixes_ImmersiveWeapons_Patch.esp=1
Hothtrooper44_ArmorCompilation.esp=1
Stealth Skills Rebalanced_COMPLETE.esp=1
Run For Your Lives.esp=1
Cloaks.esp=1
SMIM-Merged-All.esp=1
Random Alternate Start.esp=1
Chesko_Frostfall.esp=1
PerMa_Survivalism.esp=1
RND_HearthFires-Patch.esp=1
Enchanting - IDWIW.esp=1
RND_AnimalLoot.esp=1
Realistic Lighting Overhaul - Minor Cities and Town Interiors.esp=1
startershack.esp=1
Hunterborn.esp=1
FishingInSkyrim.esp=1
isilNarsil.esp=1
Hunterborn_Frostfall-Patch.esp=1
Hunterborn_RND-Patch.esp=1
My Home Is Your Home.esp=1
Tundra Defense.esp=1
PerkusMaximus_Master.esp=1
PerkusMaximus_Warrior.esp=1
PerMa Expansion 1 - Wintermyst.esp=1
Pre PaMa WAFR IW Patch.esp=0
PerkusMaximus_Mage.esp=1
Acquisitive Soul Gems.esp=1
PerkusMaximus_Thief.esp=1
Pre PaMa IW Patch.esp=0
Pre PaMa LeftHandRings WAFR Patch.esp=0
WetandCold.esp=1
PatchusMaximus.esp=1