http://fallout3nexus.com/downloads/file.php?id=9741
Cheers for the link, I'm gonna see how it looks and feels. Quite like the idea of losing the Pip-Boy, me thinks my LW's wrist is manky by now.
That is a game mechanic. It is more likely that the BoS have more members. They accept outsiders while the Enclave take years to train a new recruit from childhood. The Enclave are better killers, but are smaller in number and are most likely almost extinct. Even the great Colonel Autumn gave up. I can't wait to see the next antagonist group in Fallout 4.
The Enclave are made hard because they appear late in the game, me thinks, not because they're better soldiers compared to the BoS. It's purely for difficulty value. I'm sure if the roles were reversed and it was the BoS who arrived late and the Enclave who'd been around from day one, then the BoS would arrive as the stronger NPCs. Consider where the Enclave are coming from. For most it's probably direct from training. Not from combat. Whereas the BoS of DC have been fighting an ongoing war with Super Mutants for decades. The initiates are trained in actual combat, not in training scenarios. They'd be battle hardened and extremely savvy on any battlefield, and comfortable engaging any enemy with whatever tech in any scenario.
Take into account the sheer number of Enclave who arrive in vanilla across the Wastes, and consider how much of their tech would be taken up by savvy Wastelanders. More than most of it would into BoS hands. Wastelanders would be leaving mines for patrols, taking out commmand consoles to effectively cut them off. Groping all that fandangled shiny tech with cap Nuka symbols shining in their dust-encrusted eyes. Outcast and BoS encounters would be plentiful and even with Deathclaws unleashed the Enclave would have a hard time getting a foothold anywhere. FOFTW is probably right when he said the Enclave would just flatten the Citadel with vertibird squadrons, though.
But anyway, this isn't about canon and who has what. The OP just wanted to know which faction would win in-game if you pit them against each other. Enclave have kicked ass to the very end. They're superior across the stats, SG and EW are maxed aren't they? Compared to the BoS 70 - 80 SG, EW. S'a win for the Enclave, for the OP. But in any other circumstance, like a real conflict, I'd have the BoS down for the win. If only for having local support, and because the Wastes isn't kind to new arrivals with dodgy little command posts.