I managed to get the manual archive invalidation invalidated! thing to work for one mod (a male body replacer. I don't need no t-shirts
). Without it things are messed up, after installing it that fixed it.
But it's not working for Skykappa's http://www.fallout3nexus.com/downloads/images/12978-5-1275916868.jpg replacer. Then again, I took those directly from the FO3 page. Still, the location and name of the meshes/textures are identical to FO3's, so I don't see why it shouldn't work, but only the texture is getting replaced.
If I create an esp mod and use a different name for the mesh it works fine. Any ideas?