I am using the pastebin guide

http://pastebin.com/7gF2VLaf

it has better bodies and also an animation change. When I have the Templar Armor on, if I wear a skirt such as the templar skirt, or the imperial skirt, or another similar purple skirt, while an imperial male, the back flaps clip into the skirt constantly. I observed the skirt not clipping on a high elf female.

I wondered if there is a way, through replacers, or editing, that this could be fixed? or is it really going to be tons of work? i think the problem might be the back flaps of the male imperial templar just being too close to the buttocks, or that the skirt is too wide

showing in two pictures:

http://i.imgur.com/9VjwBzG.jpg

http://i.imgur.com/TNCMVm5.jpg

This is caused by Better Clothes replacing the imperial skirts with meshes which are shorter, but wider at the hips (the textures are also completely different, the vanilla templar skirt is yellow). As far as I can tell, they clip with all races, though (at least in the CS).

The http://www.nexusmods.com/morrowind/mods/42509/? Templar cuirass should fix the clipping, though. It is included in the guide, do you have it installed?