No. Morrowind from the start was destined to be destroyed. The Dunmer deserved it and brought it on themselves.
Besides, why do you care? We're not going back to Morrowind in-game for a very, very long time, if ever. And if/when we do go back to Vvardenfell, its destruction and reconstruction just means we'll have a unique experience the second time there. You should be happy.