Take note I've only personally played Fallout 3, and haven't even really read much about the Enclave in the entire Fallout series. But in Fallout 3, I do not recall the Enclave being clear-cut on the view of vault dwellers. It doesn't help that there is only two characters, Colonel Autumn and President Eden, that actually interact with the player character in a way that is entirely combative. Those two, I don't remember anyways, never expressed a definite hatred toward the player character-though they weren't actually born in a vault, but lived there a majority of their life in one. And they didn't really every mention the other vault dwellers.
I ask this purely out of curiosity-in another thread on this board members have discussed whether or not they think the Enclave could turn to an overall good/"nice" faction and brought up their views against anyone who even lives in the Wasteland-viewing everyone of that background(no matter how human they may be and/or look) as mutants. So what of vault dwellers? Did previous or later(Fallout New Vegas) games in the series better explain? Did Fallout 3 explain(in which case I must have forgotten or completely missed some details)?