Did Morgana get killed and you then resurrected her?
If she was dead once, all Morrowind dialog consider her as dead, including her grandpa. Obviously he will then not want to give you anything at all.
If this is the case, you should reload the last save before she died.
Thanks for the reply, but no , Morgana wasn't killed as far as I know. I've tried leaving her in Ald-Ruhn during the quest and it hasn't made a difference. The only Npc who has died so far is the witch in Hla Od, and she dies as soon as I finish the conversation without being attacked.
edit;
I went back and loaded the save where I first meet Morgana. After meeting her grandfather, hearing her story, and agreeing to help find Melvin, I walked out of the cellar then returned and got the same message saying What have you done. Where is my granddaughter. Oh noo, then he disappears.