Lol probably. I use Skyrim Redone and can't remember how most of the vanilla perks/skills operate, but do you get sneak attack bonuses when using spells?
Yes. I'm doing that now with my mage. Casting invisibility, running into a room full of enemies and setting off firestorm before anyone knows I'm around never gets old.
Don't bother getting any sneak perks. Boots with the muffle enchantment and fortify sneak are all you need.