Minor Institute spoilers below beware.
Has anyone else found a synth infiltrator in their settlements?
At my sanctuary my happiness was slowly going down and I would find murdered settlers with no indication of a raider attack, and having very high defence, food, and water.
Eventually I figured out that I had a synth posing as a settler, noticed it when I targeted her with VATS perk and she had a energy resistance of 50 something when everyone else had little to none. Saved game killed her sure enough synth component found on her body. Happiness went back up after I left. (quickly the other settlers weren't happy)
For those of you who haven't found it, go to the warwick settlement and look in the big water vats behind the main building. I'll say no more so you can find it for yourself.