You fixed this problem before and you didn't make a note of how you did it? That was your first error imo. Always make notes. Always. I've made mistakes too with my mods but luckily I've always kept notes of why things can go wrong, and I'm glad I did.
In regards to your specific issue, I can't really give an answer as there isn't much to go on. Maybe give some more info?
What info would you like?
And when I fixed it the first time it was inadvertent. I was working in Gecko deleting an un-needed Worldspace and the refs that went with it, and when I got back in game the SI problem was solved.