Second bug: The doors to the Sigil Stone room in the Kvatch Oblivion tower thingy have been removed.
I haven't a clue what could have caused these bugs or how to sort them out, but I'm guessing it's a mod. Load order?
Oblivion.esmunderdark.esmCobl Main.esmMart's Monster Mod.esmDremoraCompanion.esmFort_Cooper.esmCM Partners.esmToaster Says Share v3.esmTRoN.espDLCShiveringIsles.espNatural_Weather_by_Max_Tael.espNatural_Habitat_by_Max_Tael.espNatural_Water_by_Max_Tael.espCarcernus Prison.espM.O.E. - Undermined Leveled Gameplay - Creature Edition.espM.O.E. - Undermined Leveled Gameplay - Item Edition.espRAEVWD Cities.espRAEVWD Imperial City.espReznod_Mannequin.espMaleBodyReplacerV4.espM.O.E. - New Staffs, Blight and Ashstorms.espM.O.E. - Playable Scythe.espM.O.E. - Unlocked Palace Guard Armour.espM.O.E. - Unlocked Dremora Armour and Robes.espM.O.E. - Unlocked Glenroy and Captain Renault Blades Armour.espRTFemaleReplacerV12.espSoT_Rise of Sheogorath.espMage Equipment.espkikaiAS-SheogorathRT-sep.espAncientTowers.espCobl Glue.espCobl Si.espCobl Tweaks.espMart's Monster Mod.espMart's Monster Mod - Shivering Isles.espMart's Monster Mod - Additional Enemy NPC Vars.espMart's Monster Mod - Diverse Imperial Armor.espMart's Monster Mod - Looting NPCs & Creatures.espMart's Monster Mod - Zombies for Body Meshes.espMart's Monster Mod - Durability & Damage.espMart's Monster Mod - Spawn Rates - Increased.espMart's Monster Mod - Dungeons of MMM.espMart's Monster Mod - More Wilderness Life.espMart's Monster Mod - Extra Wounding.espMart's Monster Mod - Diverse WaterLife.espMart's Monster Mod - Diverse Runeskulls Loot.espMMM-Cobl.espCastle_Highrock.espDwemer_Skyship_1_1_0.espFort_Cooper.espM.O.E. - Tools of Kagrenac - The Secret of White Gold Tower.espM.O.E. - The Black Sacrament - Night Mother's Ritual.espSoT_TheOrderofNibenay.espKnights.espM.O.E. - Visit Valen Dreth Topic.espMart's Monster Mod - Knights.espLost Paladins of the Divines.espMart's Monster Mod - City Defences.esproad+bridges.espxulBeachesOfCyrodiilLostCoast.espxulImperialIsle.espNRB4+UL-II Patch.espNatural_Vegetation_by_Max_Tael.espM.O.E. - Bone Names and Priced Skull.espM.O.E. - Travel Services.espM.O.E. - Lucien Lachance Rumors Fix.espM.O.E. - Icons for Mythic Dawn Armour - Fix.espM.O.E. - Lycanthropy and Lichcraft.espM.O.E. - Realistic Prices, Realistic Weights, No Quest Items.espSalmo the Baker, Cobl.espBorderless_Cyrodiil-3578.espM.O.E. - Vampire Clan Raelu.espM.O.E. - Ethereal State Spell.espM.O.E. - Levitation Magic.espM.O.E. - Lock Spells.espM.O.E. - Mythic Dawn Powers.espM.O.E. - Teleportation Magic and Icarian Flight.espMadgod Powers.espTeachSpell.espSupremeMagicka.espSM_EnchantStaff.espSM_VanillaSpells.espSM_UnlockSpells.espSM_Scrolls.espSM_SigilStone.espbgMagicEV_Conjuration_for_Supreme_Magicka.espJpm's Miniature Necromancy.espRenGuardOverhaul.espactors_in_charge.espActorsInMadness.espM.O.E. - Unlocked Hairstyles.espM.O.E. - Playable Dremora and Custom Race Fix.espCM Partners.espAsharasCMPartners.espDremoraCompanion.espCobl Races.espbgBalancingEVCore.espbgMagicEV.espbgMagicItemSigil.espbgMagicEVStartspells.espbgBalancingEVOptionalFangs.espbgBalancingEVOptionalMoreEyes.espbgBalancingEVLAMEAddition.espbgBalancingEVLAMEGlue.espbgIntegrationEV.espCobl Races - Balanced.espbgMagicShaderLifeDetect.espbgMagicLightningbolt.espReal Lava 1.3.espNRB4 Standard Road Record.espBashed Patch, 0.espCharGenAmulet.esplumi_enchantments.espValenwood.espwalklikesheo.espAsharasCMBeasts.espUnderdarkMap.espTower_Of_Hadarath.espWtower.espCompanionMaster.espDock.espSummersetLandscapes.espSummerset.espVampire.espBlackscar Citadel.espSpells.espNecromancy.espCastle_Wolfspike.espRiseofMadness.espDaedra.espRoSAddon.espCultofOrder.esp00cyrstalcragfortress.espWayshrines.espXilselem.espSide's Sailing Ships.espDremora Race.espCastle.espCMCompanions.esp