Enemy Respawns are controlled by the SpawnMarker, which is like a List of which NPCs/Creatures can Spawn.
Containers are Respawned via a check-box in their Form (when you make/edit them)
Respawn Time is controlled by a Game Setting-- I don't know which one, off the top of my head, but it is default 72 hours, I believe.
No idea how a Mod can make these change between each one, but this might help in some way.