after playing on both the PC and the 360 with both fallout 3 and oblivion, Id say the 360 is better then the PC.
I started on the 360 and beat the game and all the DLC before getting the PC version and almost instantly got into the mods. I grabbed about 15 various ones that were compatible and the unofficial patches, and unlike most here claim, it didnt change the experience of the game for me. Yes they added a few new things, but they didnt really change the experience. If anything, all they did was make it feel like a FPS, and that you unlocked a newer difficulty with all the same quests and stats. the mods I downloaded turned fallout 3 from an RPG, to a "Fallout 3 CoD" mashup, which got boring quickly, and I ended up going back to my 360.
Also, the controller feels right in my hands, compared to having my hands sprawled out on a keyboard and mouse, And the lag added on the PC from the mods and continous piles of corpses I left in my wake in every area made the game almost unplayable. I had to turn almost everything off, and had to turn everything else down. MInd you im on a prety good PC, But when the vanilla game itself lags and crashes after 20 minutes, and does that even on the lowest settings, im done. I still have this here as well-
360 crashes since Fallout 3 release- 27 (crashed the other day when I was MIRVing the citadel for lulz)
PC crashes in the week I had it on the PC- 48 (4 before i downloaded mods)
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Pardon me for saying this, but what a ridiculously sobby sob-story. Almost made me cry. No really, it did!
The thing is, you're complaining about mods doing something to your gameplay that you didn't want, which begs the question of why the heck you used them to begin with? If you know what playstyle you want then why not focus on that? At this point in time, I wouldn't personally dream of using any of the famous "must have" mods. I don't, at this time, want FWE to completely make FO into a shooter with a ton of arbitrary design decisions from the modders. So I don't download it and install it.
Instead I've added a mod for cross-weapon repairs, a mod for more storage in Megaton, a mod for slower weapon degradation, a mod for better sniper scope zooming, a mod to fix autoaim, a self-made mod to make the Nerves of Steel perk less useless, a mod for better companions that incidentally also contained a mod for making caravans essential so they wouldn't die after 4 hours of playtime. I've really just scraqed the surface at this point.
Yes, there are some stability issues. I tend to have a breakdown every 5-6 hours of active play or so. Then again, I save quite often, both quick and manually, and I've got all autosave options enabled as well. A crash means a 1-minute break and typically only a few minutes worth of lost data, at worst.
Yes, the game does lag from time to time. Partially because I prefer a bit of occasional lag to decreasing view distance, but so what? Are you telling me it runs perfectly with all details maxed on an box 360? If not then what is lost by running it with matching settings on a PC?
Finally, the box-gamepad feels better to you? You feel you get better control by using some inferior miniature joysticks over an time-honed device specialized for accuracy in 2d aiming? Nah, I'm not buying it. It's merely a question of you being way too used to that inferior gamepad. I have the exact same feeling whenever I try to use a console. The controller feels odd, unwieldy, clumsy, and where the hell are my 102 keys to be configured at my own leisure?
And no, I haven't needed to reconfigure my keys 1000 times. In fact I haven't reconfigured them at all. WASD for movement, ctrl for sneaking, shift for walking, space for jumping, E for activate, R for reload / ready / holster, tab for pip / flashlight, and that's about it, isn't it? I've been thinking about binding a key to the "clear blood from screen" console command but so far I haven't bothered to figure out exactly how I'd do that, which is to say that a few blood stains aren't really bothering me enough that I can be arsed to do it.
In summary, I get the distinct feeling that you simply don't like to play games on your computer. You're right that it's easier on a console and that FO3 presents a reasonable end result unmodded, but there are still so many things that could be improved upon.