Also, Boethiah is known for deceit secret plots of murder and such. Maybe Mehrunes had Boethiah Govern over the Emperor's Death to start a chain reaction, leaving the Empire weak.
The Crimson Plague could have been set on by Peryite, in an effort to cause chaos to set an un-balance between nations.
What I'm trying to get at is, could the daedra have had a long term (over many eras) plan to kill off mortals? Even if it was slight action to cause a dispute between races to force them not to join sides many years from the present game, or cause an alliance that would strengthen one side, while weakening the others?
another example I have is say some daedric prince like "whispered" in the Aldmeri Dominion's ears causing them to take over the Empire, after it was weakened from Mehrunes attack, which would cause the Nords of skyrim to revolt, which they already have. Leaving the Daedra an open field where they won't have to worry about the Nords defending the Empire.
This is all just a theory, it could easily be proven wrong. I'd just like some "lore expert" insight.
EDIT: English is not my first language, so I'm sorry for any grammar or spelling mistakes.