Hmm... Maybe I'm wrong, then... :unsure2:
As fate would have it, I just found "Secrets of Dwemer Animunculi" in one of those ruins... I think it had vampires in it?
Anyway, it lets you summon them... How do you summon a machine? I understand summoning bound weapons and armor because they contain the anima/animus of a Daedroth, but to summon a machine seems like something completely different.
Also an Animunculus has some manner of sentience. As far as I know, there's no type of clock movement I can think of that can instill a sense of good-guy/bad-guy judgement.
The Dwemer in general, remind me of Babylonians/Mesopotamians. I can't remember exactly where I read it or heard about it, but I can swear there's some vague reference in Babylonian mythology to automatons or homonculi or golems or something like that. If you look at their ghosts, they even have that Babylonian beard thing going. I know Bethesda's lifted things from the Epic of Gilgamesh, so I wouldn't put it past them to use other sources from that era and culture.
http://www.imperial-library.info/dwemer/dwemer-image.jpg
http://www.qacps.k12.md.us/mms/george/gilgamesh.htm