I just made it to Vault 19 on my way north. Went inside and found Lem first. I talked to him and I tried to seal the sulfur but not enough skills in explosives. So I trek back up and finally talk to Cooke instead. I never agreed to help him (I chose to go down to the caves before talking to him) and I already get an option to tell him I cleared out all the Geckos. I say "Yes," and then he asked me if I want to help him. Regardless of what I pick, immediately afterwards, I get a popup telling me I'm merciful for helping. I walked out into the hall and tried to go inside of Lem's room. The door was locked. All it said was that I needed a key to open it (not a blue or RED sector card). I immediately remembered that there was a path through underneath the overseer desk. I go inside and I see Lem's exploded corpse.
What happened? If you talk to Cooke about helping him (doesn't matter if I agree or just say goodbye to end the conversation), Lem explodes and the door locks?