I think it does. Alessia invents a god who starts existing and we're dealing with the blowback millenia down the line. Humans can remember the way things used to be and Dragons can't because dragons exist differently in time than humans do, so to them Alduin was never Akatosh but humans remember that he had been. Now the kalpa is all screwy because Alduin isn't strong enough to do the awful fighting.
Which is a nice way to not really explain anything. I.e poor story.
Purely IMO of course.