So my question is a simple one I think...if I have multiple installs of Morrowind, and I want to use Wrye Mash for each install, how do I go about doing that? Thank you in advance.

Now you can use http://www.gamesas.com/index.php?/topic/1106095-wrye-mash-stand-alone/, which allow you to install it to any folder you like without Python installed.
With Melchor's WMSA and http://www.gamesas.com/index.php?/topic/1068986-wrye-mash-thread-5/ you have two installations of Morrowind covered I think. :user: